Mhc-Wide Association Results (All Jia Samples Vs Disease-Free Controls)

Association results across the major histocompatibility complex (MHC) on chromosome 6 all JIA samples versus disease-free controls. Note that coordinates are on build hg18. Columns are: CHR: chromosome SNP: SNP identifier BP: basepair position (hg18) A1: minor allele/tested allele A2: other allele (major allele) FRQ: frequency of the A1 allele INFO: imputation quality info score OR: odds ratio SE: standard error of the t-statistic (note that the t-statistic is not provided in the file) P: p-value of the SNP