uhvdb-test-db

The Unified Human Virome Database (UHVDB) test dataset The Unified Human Virome Database contains high-quality, confident virus sequences from other human virus databases and human metagenome assemblies. All sequences have been clustered and annotated to assign taxonomy, predicted hosts, functions, and lifestyle. File contents: uhvdb_metadata_test.tsv.gz: TSV file containing ametadata (virus filtering data, clusters, taxonomy, predicted hosts, lifestyle, high-level function) for all UHVDB sequences uhvdb_unique_reps_test.fna.gz: FASTA file containing all unique (dereplicated by sequence hash) UHVDB sequences uhvdb_protein_annotations_test.tsv.gz: TSV file containing annotations for all unique (dereplicated by hash) complete ORFs from genomovar representatives uhvdb_proteinsimilarity_test.tsv.gz: TSV file containing pairwise protein similarity values (>= 5.5) for all UHVDB species representatives uhvdb_genomovars_gani_test.tsv.gz: TSV file containing pairwise global ANI values (>= 99.5% ANI + 100% AF) for all UHVDB unique sequences uhvdb_species_gani_test.tsv.gz: TSV file containing pairwise global ANI values (>= 95% ANI + 85% AF) for all UHVDB genomovar representatives uhvdb_protein_test.faa.gz: FASTA file containing all unique (dereplicated by sequence hash) complete ORFs from genomovar representatives uhvdb_metadata_sylphtax_test.tsv.gz: TSV file containing metadata used when profiling samples with sylph-tax