five

R functions to filter a vcf

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DataONE2017-11-20 更新2024-06-26 收录
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These functions can be used to filter a vcf file. They can remove loci that have a given amount missing data, remove individuals that have a given amount of missing data, remove individuals by name, and create histograms either of missing data per locus or individuals. Finally, once data are filtered, there is a function to write a structure output file.
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2017-11-20
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