Additional file 2: of New insights from Opisthorchis felineus genome: update on genomics of the epidemiologically important liver flukes

Table S1. Sequenced libraries of O. felineus. Table S2. Functionally annotated genes of O. felineus. Table S3. F. hepatica transposable elements and their classification. 3.2. O. felineus transposable elements and their classification. 3.3. O. viverrini transposable elements and their classification. 3.4. C. sinensis transposable elements and their classification. Table S4. Genome-wide synteny between O. felineus, O. viverrini and ĐĄ. sinensis. Table S5. Summary statistics of the gene annotations produced by a number of prediction approaches used for the annotation of O. felineus genome assembly. Table S6. Differential gene expression in O. felineus metacercariae and adult stage. Data are presented as FPKM values (Fragments Per Kilobase Of Exon Per Million Fragments Mapped) with p-value adjusted <â 0.05. Table S7. Orthologous genes detected by ProteinOrtho software with the aid of syntenic information. Table S8. Differentially expressed genes in adult O. felineus and O. viverrini (expression values differing more than fourfold). Table S9. Differentially expressed genes in adult O. felineus and C. sinensis (expression values differing more than fourfold). Table S10. Statistics on completeness of genome annotations, as reported by BUSCO software using Eukaryota (EU) & Metazoa (MZ) sets of orthologs. Table S11. Evaluation report of O. felineus genome assembly produced by REAPR software. (XLSX 4591 kb)