Additional file 2 of The majority of microorganisms in gas hydrate-bearing subseafloor sediments ferment macromolecules

Additional file 2: Table S1. Hydrocarbon concentrations at the Qiongdongnan basin and Shenhu area from the gas hydrate zone of the South China Sea. b.d. indicates below detection (0.02 mM). Table S2. Microbial compositions based on 16S miTags inferred from metagenomes. Table S3. Genome statistics of recovered archaeal and bacterial genomes. Table S4. Relative abundances of microorganisms based on representative MAGs for each species cluster. The relative abundances (%) were determined by mapping each MAG against quality-filtered metagenome reads using CoverM. Table S5. Total number of carbohydrate-active enzymes (CAZYmes) detected in 578 genomes. CAZYmes were identified by searching against the dbCAN datebase, using Distilled and Refined Annotation of Metabolism (DRAM). Subcellular localization was determined using PSORTb. Table S6. Total number of peptidases detected in 578 genomes. Peptidases were identified by searching against the MEROPS datebase. Subcellular localization for individual peptidase was determined using PSORTb. Table S7. Details for identification of genes involved in macromolecules degradation based on presence/absence matrix. Table S10. Summary annotations of carbohydrate degradation for each genomes using Distilled and Refined Annotation of Meabolism (DRAM). Table S9. Functional annotation for each genome using METABOLIC. Table S10. Details for identification of multiheme c-type cytochromes in McrA-containing MAGs. Subcellular localization was determined using PSORTb. Table S11. Details for identification of genes in genomes containing mcrA genes based on presence/absence matrix. Table S12. Expression of genes involved in methane/macromolecules degradation and sulfate reduction in 578 MAGs, in the unit of Transcripts Per Million (TPM).