Data from: Using serially collected specimens to investigate the potential population genetic consequences of reported declines in eastern woodland salamanders

This dataset includes all data and scripts used to investigate demographic
shifts in Plethodon salamanders. We designed exonic target loci using
custom scripts, generated sequence data via exon-based target capture, and
called SNPs using SECAPR v.1.1.15. Here, we provide VCF files from our
variant calling pipeline. We calculated summary statistics using the
populations module in STACKS and estimated Tajima's D using Python
libraries. We provide all scripts used to design exonic capture probes,
process genomic data, and calculate summary statistics.