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Fig S1.

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Figshare2025-05-02 更新2026-04-28 收录
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Testing of gRNA Efficiency in Inducible 3T3-Cas9 Cells. (A) Western blot analysis of total cell extracts at various time points following incubation with doxycycline. We generated a 3T3-L1 cell line where Cas9 expression is controlled by doxycycline. (B) Immunofluorescence images of cells after 48 hours of incubation with doxycycline. Nuclei are stained with DAPI, and Flag-Cas9 is detected by immunofluorescence following doxycycline induction. Bar = 50 µm. (C) Acrylamide gel electrophoresis stained with EtBr showing PCR products using genomic DNA from 3T3-Cas9 cells after transfection with various gRNAs and treatment with doxycycline. Black arrows indicate the formation of heteroduplexes, which are absent in the controls of uninduced and untransfected cells, as well as in induced but untransfected cells (Ctrl and Ctrl2, respectively). A noticeable decrease in amplicon yield suggests significant modifications following Cas9 cleavage and DNA repair processes. (D) Western blot analysis of DBC1 protein levels in the stromal vascular fraction of adipose tissue from Dbc1LoxP/LoxP and Dbc1LoxP/LoxP;CRE mice, showing DBC1 and Tubulin as a loading control. (E) Densitometric analysis of Dbc1 normalized to Tubulin and expressed as fold change relative to Dbc1LoxP/LoxP. Data are presented as mean ± SD (n = 4 per group). Statistical significance was determined using an unpaired t-test. Fig S2. Metabolic protection of Dbc1 KO obese mice. (A) Weight gain in WT and Dbc1 KO mice fed a high-fat diet on a C57BL/6J background, showing increased weight gain in Dbc1 KO mice compared to WT control mice. (B) Fasting glucose vs. body weight in obese mice shows a positive correlation between fasting glucose and body weight in WT (wild-type) animals, as expected. However, dbc1 knockout (KO) animals do not show this correlation, reflecting the protection against developing metabolic syndrome observed in Dbc1 KO animals. Fig S3. Pathway Analysis of Gene Expression Changes in Dbc1 KO adipocytes. The selected pathway, as diagrammed in KEGG, with gene expression changes (fold change, FC) projected based on the data. Genes marked in red are overexpressed in Dbc1 KO, while those in green are downregulated. Genes shown in gray indicate no change in expression between the two conditions. Fig S4. Pathway Analysis and processing of the RNA-seq samples. A Pearson correlationmatrix of the simples. Density plot of the simples pre B and post C filtering low read counts features. Boxplot of the simples pre D and post E normalization was applied. Fig S5. Validation of RNA-seq data by qPCR. (A) Gene expression levels of Il1b, Tgfb, Tnfa, and Nfkb were measured by qPCR in adipose tissue from Dbc1loxP/loxP and Dbc1loxP/loxP;CRE mice. Data are presented as mean ± SD (n = 6 per group) and normalized to Actb (β-actin). qPCR results support the trends observed in RNA-seq data Statistical significance was determined using unpaired t-test. (B) Validation of RNA-seq findings by selecting genes with low p-values and high fold changes. Expression levels of selected genes were assessed by qPCR, consistent with differential expression patterns detected in transcriptomic analysis. (ZIP)
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