Additional file 1: Tables S1â S7. of MetaPro-IQ: a universal metaproteomic approach to studying human and mouse gut microbiota
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Table S1. Clinical information of the eligible pediatric volunteers involved in the mucosal-luminal interface sample collection. Table S2. Comparison of peptide and protein identifications between the MetaPro-IQ and matched metagenome approaches. Table S3. Summary of metagenomic sequencing and gene prediction for pediatric mucosal-luminal interface samples. Table S4. Ingredient comparison of high-fat and low-fat diets. Table S5. List of 849 significant proteins responding to the high-fat feeding. Table S6. Best hits of BLASTP alignments against NCBI nr database. Table S7. Names and one-letter codes for identified COG categories. (XLSX 611 kb)
表S1:参与黏膜-腔界面(mucosal-luminal interface)样本采集的合格儿科志愿者临床信息。 表S2:MetaPro-IQ与匹配宏基因组(metagenome)方法在肽与蛋白质鉴定方面的比较。 表S3:儿科黏膜-腔界面样本的宏基因组测序与基因预测概况。 表S4:高脂与低脂饮食的成分对比。 表S5:849种响应高脂喂养的显著差异蛋白列表。 表S6:针对NCBI非冗余(nr)数据库的BLASTP比对最佳匹配结果。 表S7:已鉴定的聚类直系同源基因簇(COG)类别名称及其单字母代码。(XLSX 611 kb)



