InterProScan domain annotation on non-PKZILLA polypeptides
收藏Zenodo2024-01-19 更新2026-05-26 收录
下载链接：
https://zenodo.org/doi/10.5281/zenodo.10011738
下载链接
链接失效反馈官方服务：
资源简介：
This is a .zip archive of the git repository and Nextflow workflow used for annotation of the non-PKZILLA protein domains (rest of proteome) using InterProScan. In brief, all possible InterProScan searches were performed via the latest InterProScan Docker container, with post-processing to remove certain redundant and overlapping PKS domain annotations. For further details, see archived files and code, and manuscript Materials and Methods.
The Nextflow ./work directory is not included to reduce complexity. Nextflow published results are available in ./results .
See also: https://doi.org/10.5281/zenodo.10023460 for analogous predictions but for all the PKZILLA proteins from Prymnesium parvum 12B1.
Key files:
./run.sh entry script for running InterProScan
GFF3 file of InterProScan features, after post processing: './results/do_simple_nonparallel_scan:gff_nested_filter/filtered/ipr_merged.gff'
提供机构：
Zenodo创建时间：
2024-01-19
