Supplementary data 1 – metadata and metabolic data for genomes used in Hidden from plain sight: Novel Chlamydiota diversity emerging from screening genomic and metagenomic data.

Supplementary data 1 – metadata and metabolic data for genomes used in Hidden from plain sight: Novel Chlamydiota diversity emerging from screening genomic and metagenomic data.

Contains all metadata for genomes assembled and genomes used, including
accession numbers, CheckM scores and Gtdbtk taxonomy. You will also find raw data used
to produce the figures.

Here you will find all metadata for genomes as well as some extra metabolic data
Yellow tabs contain:
S1 - Metadata for genomes assembled in this study extracted from SRA
S2 - Metadata for environmental MAGs recovered from NCBI non redundant sequence database
S3 - Metadata for additional Chlamydiota genomes used
Red tabs contain:
S4 - AAI percentage similarity scores used to produce genera similarity networks
S5 - ANIb percentage similarity scores used to produce species similarity networks
S6 - CRISPRcas finder results
S7 - KEGG pathway hits
S8 - KEGG pathway completeness
S9 - Gene cluster presence absence matrix used in figure 4.3a for Rhabdochlamydiaceae
S10 - Gene cluster presence absence matrix used in figure 4.3b for Simkaniaceae
S11 - Summaries for gene clusters from Anvi'o used to produce figure 1
S12 - Interproscan results for contigs with blastp results matching the large HYDA domain of T. vaginalis (XP_001322682.1), Nyctotherus ovalis (CAA76373.1), and Thalassiosira pseudonana (XP_002295160.1)
S13 - HYDDB results for contigs with blastp results matching the large HYDA domain of T. vaginalis (XP_001322682.1), Nyctotherus ovalis (CAA76373.1), and Thalassiosira pseudonana (XP_002295160.1)