Medicago ruthenica cv. 'Taihang' Raw sequence reads. Medicago ruthenica

The chloroplast genomic DNA was extracted using CTAB method. A 350 bp DNA library was constructed and then PE-150 bp was sequenced on Illumina Hiseq 2500 platform. To filter reads from the chloroplast genome, approximately 348.4 Mb of trimmed high-quality reads were mapped to the previously published cp genomes (NC_042841.1, NC_042849.1, NC_042854.1, NC_003119.8 and NC_032066.1) in the Medicago using Minimap2 v2.13-r850 with default parameter. The resulting aligned reads were co-assembled using GetOrganelle v1.7.3.1, and one circular contig was produced.