Supplementary Files for Transcriptome Profiling of induced susceptibility effects on soybean- soybean aphid interactions
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This dataset consists of two Excel spreadsheet files in <b>.xlsx</b> format, a Supplementary File and Table S1 in <b>.docx</b> format. The image files are in <b>.tiff </b>format. The data were generated as part of a study which used RNA sequencing to generate transcriptional datasets for transcriptome profiling of induced susceptibility effects on soybean- soybean aphid (Hemiptera: Aphididae) interactions<br>The data consists of the following files:Supplementary File 1: Methodology description<br>Table S1: Statistics of the transcriptomic data using RNA-seq pipeline used in this study.<br>Figure S1: A flow chart representing experimental methods.<br>Figure S2: A flow chart showing the RNA-seq data analysis pipeline.<br>Figure S3: The hierarchical clustering of top 3,000 variable genes.<br>Figure S4: The correlation between the samples using the top 75% genes.<br>Figure S5: Quality metrics of G. max sequencing data. (a) Mean quality scores per position. (b) Per sequence quality scores. (c) GC content distribution. (d) Read length distribution<br>Data File 12: The transformed transcript abundance counts for all the samples.<br>Data File 13: The hierarchical clustering of top 3,000 variable genes.<br><br><br><br><br>
提供机构:
Surendra Neupane
创建时间:
2019-05-19



