This repository contains the output files for nf-core/sarek and nf-core/tumourevo pipelines for SPN04 with purity 0.3 and coverage 50, 100 and 150x, of the SCOUT cohort.
D.SKY plot show the somatic copy number alterations (sCNAs) in cancer cell-line. For this breast cancer cell-line HCC1143, the D.SKY clearly showed the loss of chr8p and gain of chr8q, a pattern recur