遇见数据集

Combined set of SNPS including wine and flor strains and strains from other origins(Allyeast-set)

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DataONE2017-02-08 更新2024-06-26 收录
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Data for Phylogeny and population structure (Figure 1, Figure2A and B). Compressed Vcf file containing a set of biallelic variant with less than 20 % missing position among all strains, obtained from the genotyping of 20 flor and wine strains compared to 82 strains with available genome sequences (obtained from Saccharomyces genome database (http://www.yeastgenome.org/), of from the SGRP project (http://www.sanger.ac.uk/research/projects/genomeinformatics/sgrp.html) (Liti et al. 2009, Population genomics of domestic and wild yeasts. Nature, 458, 337–41)

用于系统发育与群体结构分析的数据(对应图1、图2A及图2B)。该压缩的Vcf文件包含一组双等位基因变异体,所有菌株中的位点缺失占比低于20%。该数据来源于20株佛洛(flor)酵母与葡萄酒酵母的基因分型结果,比对了82株已有可用基因组序列的菌株;这些基因组序列分别获取自酿酒酵母基因组数据库(http://www.yeastgenome.org/)以及SGRP项目(http://www.sanger.ac.uk/research/projects/genomeinformatics/sgrp.html)(Liti等,2009,《家养与野生酵母的群体基因组学》,《自然》,458卷,337–41页)

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2017-02-08
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