Additional file 2: of A transcriptome analysis reveals a role for the indole GLS-linked auxin biosynthesis in secondary dormancy in rapeseed (Brassica napus L.)

Table S1. Statistics of the RNA-seq results for the secondary dormancy of 12 samples. Table S2. Correlation analyses for each sample among three repetitions. Table S3. Detailed information of RNA-seq analysis. Table S4. DEGs isolated by the second round of selection based on the threshold |log2(Va vs Vb)-log2(Ha vs Hb)| ≥ 1. Table S5. Detailed GO enrichment analysis of the DEGs. Table S6. Detailed KEGG enrichment analysis of the DEGs. Table S7. Detailed list of all the DEGs corresponding to MapMan functional categories. Table S8. Detailed list of the DEGs involved in indole GLS-linked auxin biosynthesis. Table S9. List of genes involved in aliphatic and aromatic GLSs. Table S10. Differentially expressed transcription factors identified via RNA-seq analysis. Table S11. Differentially expressed epigenetic modifiers identified via RNA-seq analysis. Table S12. Seed quality differences in cultivars H and V. (XLSX 31002 kb)