Additional file 12 of Early-life prophylactic antibiotic treatment disturbs the stability of the gut microbiota and increases susceptibility to H9N2 AIV in chicks

Additional file 12: Supplementary Table 1. Group setting of the study. Supplementary Table 2. Sequencing depth of the 16S rRNA genes for the samples in the long-term treatment trial. Supplementary Table 3. Results of the PERMANOVA test in the LAT trial. Supplementary Table 4. Sequencing depth of the 16S rRNA genes for the samples in the short-term treatment trial. Supplementary Table 5. Information of samples used for metagenomic sequencing. Supplementary Table 6. Relative abundance of ARG types.