Data repository for "Spatial autocorrelation of species diversity and distributions in time and across spatial scales"

Data repository for the manuscript entitled "Spatial autocorrelation of species diversity and distributions in time and across spatial scales". The repository contains the following files: Scripts (*.R and *.qmd): used to produce the analyses and figures of the manuscript. Code 02_get_data, used to download data from the PostgreSQL database, is not included as it has personal information. sac_grid_occ.rds: matrix of presences and absences used to generate Figure 1. sac_grid_grain.rds: matrix of presences and absences used to generate Figure 2. sac_species_table.csv: spatial autocorrelation of the distribution of individual species for all regions, periods and grain sizes (output of Code 06_calculating_species_sac). sac_richness_table.csv: spatial autocorrelation of richness for all regions, periods and grain sizes (output of Code 07_calculating_richness_sac). logratio_jcocc.csv: logratio of the observed and expected join count, as well as the occupancy of species distributions (output of Code 09_analyses_sac_occ). mismatch_taxonomy.csv: species names in the raw atlas data that have since changed, and their updated name following the HBW/BirdLife Taxonomic Checklist (2024, version 9.0).