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Genetic structure analysis of the total data using HICKORY v1.1 (Holsinger and Lewis 2003) [36].

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Values for sampling and chain length parameters for computations were as follows: burn-in 50,000; sample 250,000; thinning 50. See text for further explanations of the four models and the model selection criteria. θB, is the best Bayesian inference estimate of the proportion of genetic diversity due to differences among contemporaneous populations, and is an analogue to FST. Dbar, is −2 times the mean posterior log likelihood and is a measure of how well the model fits the data (smaller values indicate a better fit). Dhat, is −2 times the log likelihood evaluated at the posterior mean, and it gives a measure of how well the best point estimate fits the data. pD, is a measure of model complexity, i.e., the effective number of parameters being estimated (pD = Dbar - Dhat). DIC, deviance information criterion. f, an estimate of Fis, inbreeding within a population.
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2013-07-22
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