Additional Supplementary Data File from Survival Outcomes in Cancer Patients Predicted by a Partial EMT Gene Expression Scoring Metric

This file contains the Supplementary Data not to be included in the SI as a separate figure, but as a data file which can be downloaded and accessed. Sheet 1 contains a list of EMT-relevant gene products created by a review of the literature. Genes are organized into columns based on the relevant citation last name on the top of each column. Those entries in color represent either epithelial (peach) or mesenchymal (blue) genes. Sheet 2 contains the total (non-redundant) list of possible predictors, along with ratios of two predictors for prominent EMT-related genes. For example, VIM/CDH1. Sheet 3 includes the top 50 normalizers selected based on their inability to resolve E,E/M and M groups (i.e. the EMT-independent normalization gene signature). Sheet 4 contains the regression coefficients for the top model CLDN7, VIM/CDH1 as used in Equations 2-4. Sheet 5 contains the primer design used in Figure S2.