Additional Supplementary Tables S5-S13

Table S6 The different microbial pathways in ceca of HWS and LWS. Table S7 The cecal microbiota identified at the species level. Table S8 Differentially expressed genes in ceca between HWS and LWS. Table S9 The enriched functions of differentially expressed genes. Table S10 Differentially expressed genes targeted by differentially expressed miRNAs. Table S11 The distribution of differentially methylated regions in ceca of HWS and LWS. Table S12 Genes containing differentially methylated regions. Table S13 The information of the differentially methylated regions in ceca of HWS and LWS. Table S14 Hypomethylated DMRs in HWS related to CpG Island. Table S15 Genes with altered methylation and expression levels in HWS and LWS. Table S16 The association between up-regulated genes in ceca of HWS and cecal microbiota. Table S17 The association between up-regulated genes in ceca of LWS and cecal microbiota. Table S18 Data summary for 16S rRNA gene sequencing. Table S19 Data summary for mRNA sequencing. Table S20 Data summary for small RNA sequencing. Table S21 Data summary for MBD sequencing.