Combining StarDist and TrackMate example 3 - Flow chamber dataset
收藏资源简介:
Description: Contains a StarDist example training dataset, a test dataset, and the StarDist model generated using ZeroCostDL4Mic (see https://github.com/HenriquesLab/ZeroCostDL4Mic/wiki/Stardist) Training dataset: Paired microscopy images (brightfield) and corresponding masks Microscopy data type: brightfield microscopy and masks obtained via manual segmentation (see https://github.com/HenriquesLab/ZeroCostDL4Mic/wiki/Stardist for details about the segmentation) Microscope: Images were acquired with a brightfield microscope (Zeiss Laser-TIRF 3 Imaging System, Carl Zeiss) and a 10X objective. File format: .tif (8-bit for brightfield images and 8 and 16-bit for the masks) Image size: 1024x1024 (Pixel size: 650 nm)
数据集说明:本数据集包含StarDist示例训练集、测试集,以及通过ZeroCostDL4Mic生成的StarDist模型(详见https://github.com/HenriquesLab/ZeroCostDL4Mic/wiki/Stardist)。 训练集:配对的明场显微镜图像及对应的掩码(mask)。 成像数据类型:明场显微镜图像与手动分割得到的掩码(有关分割的详细信息详见https://github.com/HenriquesLab/ZeroCostDL4Mic/wiki/Stardist)。 显微镜参数:图像采集使用明场显微镜(蔡司激光全内反射荧光3成像系统,卡尔蔡司)及10倍物镜。 文件格式:采用.tif格式(明场图像为8位深度,掩码为8位及16位深度)。 图像尺寸:1024×1024像素(像素尺寸:650 nm)。



