Tree-for-three-rumen-ciliates-FigShare.rar
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README.txtFiles Description1) MRO-gene-trees:Phylogenetic trees of putative MRO genes of three rumen ciliates. For each gene, the homologs were obtained as described in the main text, and then tree was <br>reconstructed by using FastTree (2.1.10) and saved in phyloxml format. The trees were named in “*.phyloxml”. On the tree, tips were annotated with an in house perl script. The trees of the three rumen ciliates were saved into three separate file folders: a) Entodinium furca-MRO, FastTree output tree in phyloxml formatb) Diplodinium dentatum-MRO, FastTree output tree in phyloxml formatc) Isotricha intestinalis-MRO, FastTree output tree in phyloxml format<br>2) HGT-gene-trees: Phylogeneitc trees of characterized horizontal transferred gene of three rumen ciliates. Tree was constructed by using FastTree (2.1.10)and PhyML, and saved in newick format. The trees were named in “*.nwk”.The trees of the three rumen ciliates were saved into three separate file folders, which include two subfolders(FasTree-tree and PhyML-tree):a) Efurca-HGT-NWKb) Ddentatum-HGT-NWKc) Iintestinalis-HGT-NWK<br>
提供机构：
figshare
创建时间：
2019-07-25
