Antennal Grooming Subtype Annotations and Kinematics (Replication Data for Figure 1)
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资源简介:
<p>
This folder contains the antennal grooming subtype annotations for different optogenetic trials (behavior_annotations.pkl) used for Figure 1 and its supplementary figures/videos. The accompanying .txt file (label_definition.txt) describes each behavioral label. Additionally, a PDF illustrating the tracked key points' location is provided (tracked_keypoints.pdf).
</p>
<p>
This dataset represents the raw data. The data was further segmented and passed through behavioral checks for analysis, as described in the paper.
</p>
The annotations are stored in a table with the following columns:
<ul>
<li><strong>Date:</strong> Date of the experiment.</li>
<li><strong>Genotype:</strong> Genotype of the experimental animal.
<code>aJO-GAL4 x UAS-Chrimson</code> is the genotype for the optogenetic activation of the antennal JO-F neurons.
</li>
<li><strong>Fly:</strong> Fly number.</li>
<li><strong>Exp_Type:</strong> Experiment type. For intact, optogenetic experiments, the value is <code>Beh</code>.</li>
<li><strong>Trial:</strong> Trial number.</li>
<li><strong>Frame:</strong> Frame number captured at 100 frames per second.</li>
<li>
<strong>Pose_&lt;side&gt;_&lt;key_point&gt;_&lt;axis&gt;:</strong>
Pose of the <code>&lt;key_point&gt;</code> in the <code>&lt;side&gt;</code> of the fly in 3D coordinates.
The <code>&lt;axis&gt;</code> can be 'x', 'y', or 'z'. Key point names are provided as a separate PDF file in this folder.
The origin point is defined as the center of the fly thorax.
</li>
<li>
<strong>Angle_&lt;side&gt;_&lt;joint&gt;:</strong>
Angle of the <code>&lt;joint&gt;</code> in the <code>&lt;side&gt;</code> of the fly, given in degrees.
Joint angles are defined as in Lobato-Rios, 2022, Nature Methods.
</li>
<li><strong>Stimulus:</strong> Whether the optogenetic stimulus was on or off at the time of the frame capture.</li>
<li><strong>Time:</strong> Time in seconds from the start of the experiment.</li>
<li>
<strong>Behavioral labels:</strong> (e.g., <code>background</code>, <code>unilateral_t_left</code>):
Whether the behavior is observed in the frame. The behavior labels are defined in the file <code>label_definition.txt</code> in this folder.
Only one behavior label is assigned to each frame.
</li>
<li><strong>beh_label:</strong> The behavior label for the frame.</li>
</ul>
提供机构:
Harvard Dataverse
创建时间:
2024-12-12



