Oryza sativa cultivar:Oryza sativa japonica Transcriptome or Gene expression. Oryza sativa cultivar:Oryza sativa japonica
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https://www.ncbi.nlm.nih.gov/bioproject/PRJNA343834
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To exploit the advantage of PacBio sequencing’s long reads as possible in full-length transcripts study, we used Hiseq2000 paired-end reads to correct CCSs with different minimum predicated accuracy (MPA) rather than minimum of 2 passes of the inserts and validated the full-length splicing isoforms by verifying the chained splicing junctions with at least 2 uniquely mapped Hiseq2000 reads. Our study provides a valuable alternative approach to efficiently identify and validate full-length splicing isoforms on a massive scale in higher eukaryotes with reference genome.
创建时间:
2016-09-21



