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Embeddings of Gene Ontology (GO) using OWL2Vec*

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https://zenodo.org/record/4882681
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These embeddings are from the Gene Ontology (GO) [1] downloaded on 19 Oct 2020, were created using OWL2Vec* [2], and are in binary format (output using pickle). Some information about the embedding settings and an example for how they were used are found in Ritchie et al.'s paper "Ontology Clustering with OWL2Vec*" [3]. References [1] The Gene Ontology Consortium. The Gene Ontology Resource: 20 years and still GOing strong, Nucleic Acids Research, Volume 47, 2019. Accessed 9th October 2020. [2] Chen J, Hu P, Jimenez-Ruiz E, Holter OM, Antonyrajah D, Horrocks I. OWL2Vec*: Embedding of OWL Ontologies. Machine Learning, Springer, 2021. https://github.com/KRR-Oxford/OWL2Vec-Star [3] Ritchie, A., Chen, J., Castro, L. J., Rebholz-Schuhmann, D. and Jimenez-Ruiz, E. Ontology Clustering with OWL2Vec*. Paper presented at the Deep Learning meets Ontologies and Natural Language Processing (DeepOntoNLP2021), 6-10 Jun 2021, Online.
创建时间:
2021-06-03
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