Pairwise comparisons between intra-genomic ITS1 and ITS2 variants cloned from each strain.

Numbers of transition (si) and transversion (sv), as well as the number of indels are computed in pairwise comparisons between copies 1 and 2 of ITS1 and ITS2 segments with MEGA6. The total number of nucleotides in indels is reported in brackets. Identity (%) indicates percentage of identical nucleotides between copies 1 and 2 of full-length ITS region or ITS1/ITS2 segments scored within each strain. Abbreviation: cp, copy.