Loxodonta africana (Elephant Jul. 2009 Loxafr3.0)

High confidence set 861 tRNAs decoding standard 20 AA 849 Selenocysteine tRNAs (TCA) 12 Notable atypical predictions Anticodon/isotype mismatch 92 Unexpected anticodons 9 Non-canonical anticodon loop length 1 Other tRNA-like predictions Primary filter (tRNAscan-SE pseudogenes) 43536 Secondary filter (low feature scores, possible rep. element) 8680 Tertiary filter (excessive isotype copies, possible rep. element) 334 Arg TCT 6 Leu CAG 1 Leu CAA 16 Leu TAA 5 Ile TAT 4 Tyr GTA 19 Isotype tRNA Count by Anticodon Total Ala AGC 40 GGC CGC 11 TGC 22 73 Gly ACC GCC 14 CCC 11 TCC 34 59 Pro AGG 14 GGG CGG 3 TGG 11 28 Thr AGT 12 GGT CGT 7 TGT 16 35 Val AAC 34 GAC CAC 30 TAC 38 102 Isotype tRNA Count by Anticodon Total Ser AGA 29 GGA CGA 4 TGA 7 ACT GCT 35 75 Arg ACG 13 GCG CCG 3 TCG 12 CCT 6 TCT 7 41 Leu AAG 16 GAG CAG 12 TAG 9 CAA 16 TAA 9 62 Isotype tRNA Count by Anticodon Total Phe AAA GAA 26 26 Asn ATT GTT 40 40 Lys CTT 28 TTT 37 65 Asp ATC GTC 12 12 Glu CTC 11 TTC 20 31 His ATG GTG 21 21 Gln CTG 27 TTG 11 38 Isotype tRNA Count by Anticodon Total Ile AAT 32 GAT CAT TAT 4 36 iMet/Met CAT 23/18 41 Tyr ATA GTA 19 19 Supres TCA CTA TTA 0 Cys ACA GCA 24 24 Trp CCA 21 21 SelCys TCA 12 12