Fungal genome size and composition reflect ecological strategies along soil fertility gradientsadd code and derived data

This dataset includes all data as well as the scripts used to produce figures from both the main text and the supporting information from Zhang et al. (2023) " Fungal genome size and composition reflect ecological strategies along soil fertility gradients".

Detailed description:

genome_size_lifestyle.csv: the file containing genome size and lifestyles for all fungi.

ncbi_fungi_GC_content.csv: files containing GC content data from NCBI.

Fungi_all_gs_gc_match.csv: files containing fungal species that both have the GC and genome size values. 

genome_size_fungal_traits.csv: files containing other fungal traits data for species that have genome size data.

All data above are the raw data files. By contrast, the following data files, including Australian_Microbiome_GC_CWM.csv, Australian_Microbiome_Genomesize_CWM.csv, Appendix_S1.csv, Appendix_S3.csv are derived data and the code Fig3.R can be used to generate these data files.

Fig4_slope_data.csv was generated from FigS4_stats.R, FigS5_stats.R, FigS6_stats.R.

For each of these figures there is their respective R script and the reorganized dataset used to produce them. R scripts are responsible for the production of Figures 1-4 in the main text and most of the supplement respectively.