Additional file 4 of Structural variant analysis of a cancer reference cell line sample using multiple sequencing technologies

Additional file 4: Supplementary Table S4. SV High Confidence Consensus Call Set. The SVs from initial callset are further filtered based on consensus scores, SVs that were called in at least two platform call sets by multiple software tools were selected. Additional filtering applied to remove overlap SVs and SVs on the blacklist regions as well as the on three chromosomal regions with normal loss of heterozygosity LOH (chr6p, chr16q, and chrX) to obtain a high-confidence call set. multiple break point events were named as BNDs and further characterized in Additional file 15.