five

Details of all simulations run for the trimer, dodecamer and 20-mer systems.

收藏
NIAID Data Ecosystem2026-03-07 收录
下载链接:
https://figshare.com/articles/dataset/_Details_of_all_simulations_run_for_the_trimer_dodecamer_and_20_mer_systems_/444424
下载链接
链接失效反馈
官方服务:
资源简介:
This table presents simulations done with OPEP (coarse-grained potential) and GROMACS (all-atom potential). (a)The total simulation time for OPEP REMD simulations in the format time_per_replica x number_of_replicas. (b)The label of the OPEP/GROMACS structures extracted. The label indicates the number of monomers, the potential used (OP for OPEP and GR for GROMACS), the simulation index (1,2 or p (preliminary)) and the letter ID of the structure. (c)The range of temperatures (in K) used for OPEP REMD simulations. (d)The total simulation time for GROMACS simulations. MD simulations are indicated by only one number while, for REMD simulations, the total simulation time is given in the format time_per_replica x number_of_replicas. (e)The total number of atoms in the system including protein and solvatation water atoms. (f)The temperature used in GROMACS simulations (in K).
创建时间:
2011-05-19
二维码
社区交流群
二维码
科研交流群
商业服务