Additional file 1 of Comparative transcriptomic analysis of maize ear heterosis during the inflorescence meristem differentiation stage

Additional file 1: Supplementary Table S1. Maize ear traits analysis of lx9801 and lx9801hlEW2b in two environments. Supplementary Table S2. Comparison of inflorescence meristems size between lx9801, lx9801hlEW2b, Zheng58, HY and CK with immature ears. Supplementary Table S3. Distribution of gene expression levels in each sample. Supplementary Table S4. Differentially expressed genes between HY and CK hybrids. Supplementary Table S5. GO enriched terms of additive expressed genes in the Zheng58 × lx9801hlEW2bhybrid. Supplementary Table S6. GO enriched terms of additive expressed genes in the Zheng58 × lx9801 hybrid. Supplementary Table S7. GO enriched terms of non-additive expressed genes in the Zheng58 × lx9801hlEW2b hybrid. Supplementary Table S8. GO enriched terms of non-additive expressed genes in the Zheng58 × lx9801 hybrid. Supplementary Table S9. Maker DEGs with ASE expression pattern in HY hybrid involved in regulation of ear development. Supplementary Table S10. Maker DEGs with ASE expression pattern in both HY and CK hybrids involved in regulation of ear development. Supplementary Table S11. Maker DEGs with ASE expression pattern in CK hybrid involved in regulation of ear development. Supplementary Table S12. Maker DEGs with additive expression pattern in HY hybrid involved in regulation of ear development. Supplementary Table S13. Maker DEGs with additive expression pattern in CK hybrid involved in regulation of ear development. Supplementary Table S14. Maker DEGs with non-additive expression pattern in HY hybrid involved in regulation of ear development. Supplementary Table S15. Maker DEGs with non-additive expression pattern in CK hybrid involved in regulation of ear development.