遇见数据集

FASTA file of sequences in Trichodesmium field metaproteomes mapped to a Trichodesmium metagenome plus cyanoGEBA species genomes from samples collected in the Atlantic and Pacific Ocean between 2000 and 2018

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DataONE2020-04-30 更新2024-06-08 收录
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FASTA file of sequences in Trichodesmium field metaproteomes analyzed by 2D LC-MS/MS mapped to a Trichodesmium metagenome (IMG ID 2821474806) plus cyanoGEBA species genomes (Shih et al, 2013). Samples were collected in North Atlantic surface waters, at station BATS (Bermuda Atlantic Time-series Study), and station ALOHA (A Long-Term Oligotrophic Habitat Assessment) between 2000 and 2018. Related datasets: Trichodesmium field metaproteomes - peptide spectral counts: https://www.bco-dmo.org/dataset/787168 Trichodesmium field metaproteomes - protein spectral counts: https://www.bco-dmo.org/dataset/787147 Trichodesmium sample provenance: https://www.bco-dmo.org/dataset/787093 - Sample provenance file, which includes sample locations, filter sizes

本数据集包含经二维液相色谱-串联质谱(2D LC-MS/MS)分析的束毛藻(Trichodesmium)野外宏蛋白质组序列的FASTA格式文件(FASTA),序列比对至束毛藻宏基因组(metagenome,IMG编号:2821474806)以及cyanoGEBA物种基因组(Shih等,2013)。样本于2000年至2018年间采集自北大西洋表层海水,采样站点包括BATS(百慕大大西洋时间序列研究站)与ALOHA(长期寡营养栖息地评估站)。 相关数据集: 束毛藻野外宏蛋白质组——肽段光谱计数:https://www.bco-dmo.org/dataset/787168 束毛藻野外宏蛋白质组——蛋白质光谱计数:https://www.bco-dmo.org/dataset/787147 束毛藻样本溯源信息:https://www.bco-dmo.org/dataset/787093 —— 该文件为样本溯源文件,包含样本采集地点与滤膜尺寸参数。

创建时间:
2023-12-31
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