Data from: Three-dimensional midwater camouflage from a novel two-component photonic structure in hatchetfish skin

3D FDTD hatchetfish nearfield scattering calculationsFolder containing all files and data necessary to model and plot Figure 4, the 3D nearfield scattering calculations from the hatchetfish skin using FDTD and MEEP.Meep3DNearfieldBackscatter_AH_March2017.zipMeepFarFieldFluxsetup_AH_March2017Folder containing files for calculating and plotting figure 2c,2d and 2e, the farfield backscatter from hatchetfish skin.MeepScatteringCalculationSetup_ER_march2017Folder containing all files necessary to calculate and plot Figure 3b, the scattering phase functions of different types of single cells.Threshold Camouflage CalculationMatlab file used to calculate threshold detection for bioluminescent searchlight predator in Figure 5bthresholdWarrant.mBRDF plot, Figure 2aMatlab file for opening BRDF data called S17_grn_BRDF_around_incTheta_8.mat and plotting like Figure 2a. Requires S17_grn_BRDF_around_incTheta_8.mat.percentanisotropic.mBRDF dataMat file to be used with percentisotropic.m for plotting BRDF data from Figure 2a.S17_grn_BRDF_around_incTheta_8.matHatchetfish raw camera angleFolder containing raw images of hatchetfish with angled incoming light and necessary text file used for plotting bar graph in 6a with barplot.m.angledng.zipHatchetfish raw camera verticalFolder containing raw camera images of hatchetfish under vertical illumination. Also includes text files containing data used in bar graph in figure 6a.hatchetfishdng.zipControl raw camera dngFolder containing raw images of control objects (aluminum, mirror, spectralon) for use in bar graph of figure 6a.verticalcontroldng.zipBar plot in Figure 6aFolder containing all files and data needed to plot figure 6a. Text data (pixel averages of the B channel from processed raw images) is obtained using hatchetfishpicanalysis.m.barplot.zipHatchetfish Image analysisMatlab file used to analze raw images of hatchetfish and control objects in different illuminations. Raw image files are contained in 3 folders: Hatchetfish raw camera angle, Hatchetfish raw camera vertical and Control raw camera dng.hatchetfishpicanalysis.mQuantifying Photophore GuideFiles needed to quantify light exiting downwelling photophores when entering through fish side.Photophorequant.zip