Petri-DB: salmon transcript indexes (v1)
收藏Zenodo2026-05-30 更新2026-06-05 收录
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https://zenodo.org/doi/10.5281/zenodo.20453503
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资源简介：
Pre-built salmon transcript indexes for RNA-seq quantification (transcript-level abundance). All indexes are decoy-aware (selective alignment) using the corresponding genome chromosomes as decoys (salmon official recommendation).
Build parameters: salmon 1.11.4, k=31, SSHash format.
Included (v1):- Arabidopsis thaliana TAIR10.1 (NCBI RefSeq GCF_000001735.4, 53,828 transcripts + 7 decoy seqs)- Marchantia polymorpha MpTak_v7.1 (NCBI GenBank GCA_039105155.1, 22,895 transcripts + 12 decoy seqs)- Acaryochloris marina MBIC11017 ASM1810v1 (NCBI RefSeq GCF_000018105.1, 7,568 CDS + 10 decoy seqs)
Each tarball is flat (no parent directory) and contains salmon index files plus a .petri-meta.json source/build manifest.
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Zenodo创建时间：
2026-05-30
