NanoRTax pipeline output
收藏NIAID Data Ecosystem2026-03-14 收录
下载链接：
https://figshare.com/articles/dataset/NanoRTax_pipeline_output/21108976
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资源简介：
This data consist of the NanoRTax (https://github.com/genomicsITER/NanoRTax) pipeline output for the 31 ICU tracheal aspirate samples analyzed in the complementary study.
Taxonomic classification is based on Kraken2 tool with the NCBI RefSeq database containing only bacterial genomes.
Reports show the number of reads assigned to an specific taxon at multiple levels. Diversity reports include total read count, Shannon and Simpson diversity indexes. Annotated reports and Kraken original report are also available.
创建时间：
2022-09-14
