Overview of reads from raw data to cleaned sequences.
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3ADT&length filter: reads removed due to 3ADT not found and length with 25 nt were removed.Junk reads: Junk:> = 2N,> = 7A,> = 8C,> = 6G,> = 7T,> = 10Dimer,> = 6Trimer, or> = 5Tetramer.Rfam: collection of many common non-coding RNA families except micro RNA; http://rfam.janelia.org.Repeats: prototypic sequences representing repetitive DNA from different eukaryotic species; http://www.girinst.org/repbase.Notes: there is overlap in mapping of reads with mRNA, rRNA, tRNA, snRNA, snoRNA and repeats.Overview of reads from raw data to cleaned sequences.
创建时间：
2015-12-02
