Data and code to Social network positions of common waxbills are resilient to prolonged absence and manipulation of ornamental plumage

Data and code to replicate the analyses in the paper "Social network positions of common waxbills are resilient to prolonged absence and manipulation of ornamental plumage" Gomes et al. (2023, Animal Behaviour). This is composed by two R script files with code to replicate analyses and custom-made functions to run specific analyses, one dataset with individuals information within the two experiments, and one set of data as R object with all the data needed to run analyses. Specifically, it contains: - 'R code _ SNA_script.R': the complete R scripts needed to replicate social network analyses present in the paper, concerning both experimental manipulation analyses. This should be the only script ran, being the others imported or sourced to R by this code. - 'data _ manipulations treatment.txt': dataset containing the experimental information of all birds present in, at least, one of the experiments. This dataframe contains the bird ID, sex, origin of waxbills prior to experiments, type of manipulation in either experiment. - 'R objects_ networks_data.RDATA': it contains the social networks, social dominance scores, and the total time in RFID system, computed for either experimental manipulation's periods. - 'R code _ DSP-BC_function.R': R script with custom-made functions to run one methodological procedure of the social network analysis. Article reference: "Social network positions of common waxbills are resilient to prolonged absence and manipulation of ornamental plumage", Animal Behaviour, 2023. Ana Cristina R. Gomes, CIBIO/InBIO, Universidade do Porto, Vairão, Portugal; Neeltje J. Boogert, Centre for Ecology and Conservation, University of Exeter, Penryn, UK; Gonçalo C. Cardoso, CIBIO/InBIO, Universidade do Porto, Vairão, Portugal. March 2023, Ana Cristina R. Gomes ([e-mail]).用于复现论文《普通梅花雀的社会网络地位对长期缺失与装饰羽饰操控的耐受性》（Social network positions of common waxbills are resilient to prolonged absence and manipulation of ornamental plumage，Gomes等，2023，Animal Behaviour）分析流程的数据集与代码。 本数据集包含两类R脚本文件（分别用于复现分析流程与编写执行特定分析的自定义函数）、一份收录两项实验内个体信息的数据集，以及一份包含所有分析所需数据的R对象数据集。 具体内容如下： - `R code _ SNA_script.R`：用于复现论文中两类实验操控分析所需的完整社会网络分析（Social Network Analysis, SNA）R脚本。仅需运行此脚本，其余脚本均可通过该代码完成导入或源调用至R环境。 - `data _ manipulations treatment.txt`：收录至少参与一项实验的所有鸟类的实验信息数据集。该数据框包含鸟类编号、性别、实验前普通梅花雀的来源地，以及两项实验中各自的操控类型。 - `R objects_ networks_data.RDATA`：包含各实验操控阶段计算得到的社会网络、社会支配得分，以及在射频识别（Radio-Frequency Identification, RFID）系统中的总停留时长。 - `R code _ DSP-BC_function.R`：包含用于执行社会网络分析中某一方法学流程的自定义函数的R脚本。 论文引用信息： 《普通梅花雀的社会网络地位对长期缺失与装饰羽饰操控的耐受性》，《动物行为》，2023年 作者：Ana Cristina R. Gomes（葡萄牙波尔图大学CIBIO/InBIO研究所，瓦里昂）；Neeltje J. Boogert（英国埃克塞特大学生态与保护中心，彭林）；Gonçalo C. Cardoso（葡萄牙波尔图大学CIBIO/InBIO研究所，瓦里昂） 数据集发布时间：2023年3月，联系人：Ana Cristina R. Gomes（电子邮箱：[e-mail]）