遇见数据集

Molecular Docking and Dynamics data for the MdtF efflux pump

收藏
Zenodo2025-03-19 更新2026-05-26 收录
官方服务:

资源简介:

The dataset consists of: a) Molecular dynamics (MD) simulation trajectories (.nc format) for three replicas of each system, generated using Amber24 software. These trajectories, along with topology files (.parm), were used to investigate the conformational preferences and other analyses (hydration, h-bond) in AcrB and MdtF (WT and V610F). b) Molecular docking poses for the distal binding pocket (DP) and entrance channels CH2 and CH3 at neutral (pH 7.4) and acidic (pH 5.7) conditions. Details of ZIP files: Trajectories_AcrB Trajectories_MdtF_WT Trajectories_MdtF_V610F Docking poses CH2 Docking poses CH3 Docking poses DP

提供机构:
Zenodo
创建时间:
2025-03-19
二维码
社区交流群
二维码
科研交流群
商业服务