Supplementary data for "Origin and evolution of acrocentric chromosomes in human and great apes"

This archive contains supplementary data for the paper:"Origin and evolution of acrocentric chromosomes in human and great apes"by authors:Steven J. Solar, Prajna Hebbar, Leonardo Gomes de Lima, Alex Sweeten, Arang Rhie, Tamara Potapova, Luciana de Gennaro, Andrea Guarracino, Juhyun Kim, Brandon D. Pickett, Benedict Paten, Melissa A. Wilson, Sergey Koren, Erik Garrison, Evan E. Eichler, Mario Ventura, Jennifer L. Gerton, Adam M. Phillippy Subdirectories include: analysis_code : custom scripts and code used to make manuscript figures and tables chromosome_dotplots : moddotplot self-identity heatmaps for all ape chromosomes gene_msas : multiple sequence alignments for all analyzed genes intron_msas : multiple sequence alignments for GGT and FRG1 introns satellite_annotations : combined satellite annotations for all ape species sst1_msa : multiple sequence alignment for the SST1 macrosatellite in gorilla