A Systematic Comparison of Single-Cell Perturbation Response Prediction Models

This repository contains the in-house datasets and analysis source code for the study "A Systematic Comparison of Single-Cell Perturbation Response Prediction Models". In-house Datasets: Perturb_KHP_sub10.h5ad Perturb_cmo_V1_sub10.h5ad Source Code: Model_predict_code.zip: Scripts used for running the perturbation response prediction models. Metrics_code.zip: Scripts used for calculating the model evaluation metrics. Plots.zip: Source code for generating the figures presented in the paper.