HG002 Benchmark VCF for Trupath Genome

README File Description HG002_25x_ONT_Clair3_SNV.vcf.gz Clair3 output on 25x HG002 ONT R10 data HG002_25x_PacBio_Clair3_SNV.vcf.gz Clair3 output on 25x HG002 PacBio Revio data HG002_25x_ONT_Sniffles2_SV.vcf.gz Sniffles2 output on 25x HG002 ONT R10 data HG002_25x_PacBio_Sniffles2_SV.vcf.gz Sniffles2 output on 25x HG002 PacBio Revio data HG002_illumina_35x_deepvariant_SNV.vcf.gz DeepVariant output on 35x HG002 Illumina SBS data HG002_illumina_35x_Manta_SV.vcf.gz Manta output on 35x HG002 Illumina SBS data HG002_illumina_35x_DRAGENv4.4.4_SV.vcf.gz DRAGEN output on 35x HG002 Illumina SBS data HG002_illumina_35x_DRAGENv4.4.4_SNV.vcf.gz DRAGEN output on 35x HG002 Illumina SBS data HG002_TrupathGenome_rep1_SNV.vcf.gz DRAGEN output on 35x HG002 rep1 Trupath Genome data HG002_TrupathGenome_rep1_SV.vcf.gz DRAGEN output on 35x HG002 rep1 Trupath Genome data HG002_TrupathGenome_rep2_SNV.vcf.gz DRAGEN output on 35x HG002 rep2 Trupath Genome data HG002_TrupathGenome_rep2_SV.vcf.gz DRAGEN output on 35x HG002 rep2 Trupath Genome data HG002_TrupathGenome_rep3_SNV.vcf.gz DRAGEN output on 35x HG002 rep3 Trupath Genome data HG002_TrupathGenome_rep3_SV.vcf.gz DRAGEN output on 35x HG002 rep3 Trupath Genome data HG002_TrupathGenome_rep4_SNV.vcf.gz DRAGEN output on 35x HG002 rep4 Trupath Genome data HG002_TrupathGenome_rep4_SV.vcf.gz DRAGEN output on 35x HG002 rep4 Trupath Genome data Detailed benchmark commands can be found at https://github.com/jamesc99/Constellation/