chr11 of the HoxBDel(i9-13):Ins(CBS5-10)/Del mutant genome used in Lopez-Delisle et al.

Both alleles of chr11 of the HoxBDel(i9-13):Ins(CBS5-10)/Del mutant genome used in Lopez-Delisle et al..

HoxBDel is a deletion of bases 96193822 to 96368393 included.

HoxBDel(i9-13):Ins(CBS5-10) is composed of: a deletion of 96193812 to 96193909 included, deletion of 96197562 to 96264972 included, the insertion in place of 96266339 to 96266430 of a cassette of 3122bp containing 6 CBS binding sites (see below) and a deletion of 96368384 to 96368391 included. The cassette is composed of 96198511 to 96199030, followed by 96223753 to 96223991, followed by a 'G', followed by 96223992 to 96224032, followed by a 'T', followed by 96224033 to 96224272, followed by 96234852 to 96235371, followed by 96240168 to 96240687, followed by 96255914 to 96256433, followed by 96261499 to 96262018.

The fasta files were built from chr11 of mm10 (http://hgdownload.soe.ucsc.edu/goldenPath/mm10/chromosomes/chr11.fa.gz).