Additional file 3 of To kill or to be killed: pangenome analysis of Escherichia coli strains reveals a tailocin specific for pandemic ST131

Additional file 3. The Additional file 3 is a compressed file library (zip package) containing 11 files. File 1 genome list with serotypes, sequence types, phylogroups, etc. File 2A pangenome matrix determined with CD-HIT. File 2B softcore genome GF list determined with CD-HIT. File 3A pangenome matrix determined with ProteinOrtho. File 3B softcore genome GF list determined with ProteinOrtho. File 4 the GFs of the six distinctive clusters. File 5 summary of the strains’ virulence and antibiotics resistance. File 6 antibiogram data. File 7 virulence factor PAM. File 8 coincident pairwise association results from CoinFinder. README.附加文件3。本附加文件3为ZIP压缩包格式的文件库，共计包含11个文件。文件1：包含血清型、序列型、系统发育群等信息的基因组列表。文件2A：经CD-HIT分析得到的泛基因组矩阵。文件2B：经CD-HIT分析得到的软核心基因组基因家族（Gene Family, GF）列表。文件3A：经ProteinOrtho分析得到的泛基因组矩阵。文件3B：经ProteinOrtho分析得到的软核心基因组GF列表。文件4：6个特异性聚类的GF列表。文件5：菌株毒力与抗生素抗性汇总表。文件6：抗菌药物敏感性试验数据。文件7：毒力因子PAM（Point Accepted Mutation Matrix）。文件8：来自CoinFinder的成对共现关联分析结果。附带README自述文件。