遇见数据集

Paulinella micropora KR01 assembled transcripts

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Zenodo2021-11-18 更新2026-05-25 收录
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Description of files: <strong>5RACE_Combined_D_L_assembly.fa</strong> Transcripts assembled from 5-prime enriched RNA sequencing reads (cap-switching transcripts). Read data available from NCBI’s SRA repository (BioProject ID PRJNA730897). <strong>Standard_RNAseq_transcripts.fa</strong> Transcripts assembled from standard RNA sequencing reads (standard transcripts) that align to the <em>P. micropora </em>KR01 genome. Read data available from NCBI’s SRA repository (BioProject ID PRJNA568118). <strong>5RACE_Combined_D_L_assembly_mapped.seqnames.txt</strong> Names of the cap-switching transcripts that align to the <em>P. micropora </em>KR01 genome. <strong>5RACE_Combined_D_L_assembly_unmapped.seqnames.txt</strong> Names of the cap-switching transcripts that no not align to the <em>P. micropora </em>KR01 genome. <strong>5RACE_SL_Transcripts.seqnames.txt</strong> Names of the cap-switching transcripts that align to the <em>P. micropora </em>KR01 genome and encode a <em>Paulinella</em> spliced-leader sequence. <strong>5RACE_SL_Transcripts_unique2RACE.seqnames.txt</strong> Names of the cap-switching transcripts that align to the <em>P. micropora </em>KR01 genome, encode a <em>Paulinella</em> spliced-leader sequence, and are unique to the cap-switching dataset (i.e., are not encoded in the standard transcripts). <strong>Standard_RNAseq_SL_transcripts.seqnames.txt</strong> Names of the standard transcripts that align to the <em>P. micropora </em>KR01 genome and encode a <em>Paulinella</em> spliced-leader sequence.

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Zenodo
创建时间:
2021-11-18
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