Diptera Bait Design and Testing Files

The ZIP archive contains the files used to identify, design, and test probes targeting conserved loci in Diptera. The *-design-steps.md file is a description of the design steps followed for the group. The "BAM" directory contains mappings of real/simulated reads to the base genome sequence for the group. The "BED" directory contains BAM files converted to BED, as well as intermediate BED files created during BED processing. The "BED" directory also contains the database of putatively conserved loci in the exemplar+base genome taxa, and the temporary probe design file. The "*-probes" directory contains the database of temporary probe mappings to exemplar taxa, several intermediate files, and the principal probe design file. The "in-silico-test" directory contains all data from in-silico testing of the principal probe design file.本ZIP压缩包涵盖了用于识别、设计并测试靶向双翅目（Diptera）保守位点的探针所需的全部文件。其中*-design-steps.md文件为本次研究所遵循的探针设计流程说明文档。"BAM"目录存储了对应本次研究类群的真实/模拟测序读段比对至参考基因组序列的比对结果文件。"BED"目录包含了由BAM文件转换得到的BED格式文件，以及BED格式处理过程中生成的中间文件。此外，"BED"目录还存储了模式类群+参考基因组类群中推定保守位点的数据库，以及临时探针设计文件。"*-probes"目录存储了临时探针比对至模式类群的比对数据库、若干中间文件以及核心探针设计文件。"in-silico-test"目录存储了针对核心探针设计文件开展硅基测试（in silico）的全部相关数据。