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RNA hairpins randomly generated by "make_a_hairpin.py"
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创建时间：
2024-10-11
相关数据集
Base pair distance between the sampled and native structures for cis -regulatory elements from Hepatitis C virus and HIV
Native structure is here taken as the Rfam consensus structure from the seed alignments of these elements of HCV and HIV. Two measures are given. The average distance represents the average base pair
NIAID Data Ecosystem60
Structures of phage-related introns predicted using LinearTurboFold
Files used to create SVG illustrations shown in Supplementary figure S2 of the paper:1. LinearTurboFold alignments/structures2. GFF annotation files used to color structure (results of annotate_intron
Figshare2025-01-31 更新40
Benchmark results.
A comparison of three secondary structure prediction algorithms, using shape data from Deigan et al. [15] for the three RNA molecules, yeast aspartyl tRNA (asp-tRNA), hepatitis C virus internal riboso
Figshare2015-12-02 更新20
Mutation calls and RNA fold prediction in rubella virus genomes.
S3A. The list of 993 mutations in six rubella isolates (from [20]). Sequences are shown in DNA format (T instead of U) to maintain compatibility with other outputs of the mutation signature R-script.
NIAID Data Ecosystem50
Structural prediction of RNA switches using conditional base-pair probabilities
An RNA switch triggers biological functions by toggling between two conformations. RNA switches include bacterial riboswitches, where ligand binding can stabilize a bound structure. For RNAs with only
NIAID Data Ecosystem30
