SupplementaryDataset2.tar.gz

<b>Supplementary Dataset 2</b><b>fasta_original.tar.gz</b> - Original FASTA files (unfiltered, unaligned, untrimmed). Files with sequences representing the members of the Stramenopila-Alveolata-Rhizaria orthogroups, plus homologs in other eukaryotes and in prokaryotes. These form the input for the phylogenetic analysis, which resulted in the rhizarian clades for which the origin was detected (as in phylogenies_analysed_annotated_pdf).<b>phylogenies_original.tar.gz</b> - Maximum likelihood phylogenies inferred by IQ-TREE, containing the rhizarian clades for which the origin was detected (as in phylogenies_analysed_annotated_pdf). <b>phylogenies_analysed_annotated_pdf.tar.gz</b> - Annotated single gene trees in pdf format for rhizarian clades for which either an LGT or vertical origin was detected (n=32647). More information can be found in Supplementary Table 2 of Van Hooff &amp; Eme (2023)<br>