遇见数据集

Additional file 4: of A purely bioinformatic pipeline for the prediction of mammalian odorant receptor gene enhancers

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Mendeley Data2024-06-29 更新2024-06-29 收录
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Annotation tracks highlighting clusters and solitary genes for selected genomic architectures. BED-formatted text files (.bed) annotating loci, at a given threshold distance (in Mb), for different gene lists. File names are composed by list type (either: main olfactory epithelium, MOE; olfactome; vomeronasal organ, VNO; T-cell receptor genes, “t_cell_receptor”), species and threshold value (periods in numerical values being replaced by underscores, “_”). A “NO-PSEUDO” at the beginning of the file name indicates that the gene list originating the file is devoid of pseudogene-flagged entries. Text files are provided as a single compressed (.zip) file available in the Open Science Framework repository, see paragraph “Availability of data and material”. (ZIP 155 kb)

针对选定的基因组架构,本数据集提供用于突出显示基因簇与单基因的注释轨道。相关注释以BED格式文本文件(.bed)呈现,针对不同基因列表,以指定阈值距离(单位:兆碱基,Mb)注释基因座。文件名由基因列表类型、物种名称及阈值数值三部分组成,其中基因列表类型可选值包括:主嗅觉上皮(main olfactory epithelium, MOE)、嗅觉组(olfactome)、犁鼻器(vomeronasal organ, VNO)、T细胞受体基因(对应命名为“t_cell_receptor”);数值型阈值中的小数点需替换为下划线“_”。若文件名开头带有“NO-PSEUDO”字样,则表明生成该文件的基因列表未包含标记为假基因的条目。所有文本文件打包为单个压缩文件(.zip),可从开放科学框架(Open Science Framework)仓库获取,详见"Availability of data and material"段落。(压缩包大小:155 kb)

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2023-06-28
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