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Assembly, binning, binning refining and gold standard for Zymo mock metagenome
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创建时间：
2022-02-11
相关数据集
WGS of bacteria used in a diverse Mock. MOCK_WGS_227+61
A total of 227 genomes were sequenced using Illumina HiSeq 4000, as will serve as a baseline for benchmarking various metagenomics tools. In addition, 61 other genomes used for illustrating intra-spec
NIAID Data Ecosystem70
bacterial GWAS benchmark simulations: Moderate LD dataset
Supplementary data for the paper "Benchmarking bacterial genome-wide association study (GWAS) methods using simulated genomes and phenotypes": https://www.biorxiv.org/content/10.1101/795492v1
Figshare2019-10-08 更新40
CAMI Airways (Co-assembly) dataset and binning results
CAMI Airways dataset from the toy Human Microbiome Project dataset of the second Critical Assessment of Metagenomic Interpretation. Contains the following files. - Contigs file- Paths file (metaSPA
Figshare2021-08-30 更新30
Metagenome assembled genomes co_3-Bin_5_1.fa
Co-assemblies were binned with CONCOCT within anvi’o v5.1 by clustering scaffolds 2500 bp or longer into metagenome assembled genomes (MAGs) and manually refining them within the anvi’o platform. Furt
Figshare2021-05-06 更新60
HG002 HiFi reads. Homo sapiens
WGS of HG002/NA24385 with PacBio Sequel II Chemisty 2.2
NIAID Data Ecosystem40
