Additional file 1 of The roles of hybridization and habitat fragmentation in the evolution of Brazil’s enigmatic longwing butterflies, Heliconius nattereri and H. hermathena

Additional file 1: Table S1. Sample and sequencing information for Brazilian Heliconius hermathena and H. nattereri generated in this study. Table S2.Heliconius hermathena and H. nattereri genome sequencing data. Table S3. Samples used for mitochondrial genome assemblies using NOVOplasty (Dierckxens et al., 2017, Nuc Acids Res). Table S4. Sample information for other Heliconius species used in this study. Table S5. Summary statistics of nucleotide diversity per site (pi) and Tajima’s D calculated in 100 kb genome-wide. Table S6. Numbers of substitutions in Heliconius nattereri and relatives. Table S7. Numbers of substitutions in Heliconius hermathena and relatives. Table S8. Whole genome mean FST and 95% empirical confidence interval between H. hermathena populations. Table S9. Whole genome mean FST and 95% empirical confidence interval between H. erato populations. Table S10. Whole genome mean FST and 95% empirical confidence interval between H. melpomene populations. Table S11. Nucleotide diversity, overall and pairwise FST estimated for H. hermathena mitochondrial genomes. Table S12. Patterson’s D statistics calculated in 10 kb windows across all autosomes. H. erato samples are from French Guiana, the geographically closest population to H. hermathena.